Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015884059.1_cds_XP_016438705.1_34344
CDS Infomation

[gene=LOC107764614] [db_xref=GeneID:107764614] [protein=pentatricopeptide repeat-containing protein At3g20730-like isoform X2] [protein_id=XP_016438705.1] [location=599..2152] [gbkey=CDS]
Sequence

ATGTCCAATGACATGGTGTCTGCCTGCAATTTGTTTGATAAATTGCCTGAAAGGAATGTG
GTTTCATGGACTGCGCTTTTATCTGGGTACTCTCAGAATGGATATTCACAAGAAGCCCTT
GATGTGTTTGTTGCTATGCGTAGGGAAGGGGTGAGGGCAAATCAATTTACTTATGGAAGC
GTTTTAAGGGCGTGCACTAGTGTATCATGTTTGAATTTAGGAAAGCAAATACAAGGGTGC
ATTCAGAAGAGCAGGTTTTTGGATAATTTGTGTGTACAGAGTGCGTTGGTTGATTTTCAT
TCTAAGTGTGGGGCAATGGAGAATGCTTTTTGTGTTTTCGAGTCAATGGCAGAGAGGGAT
TTGGTTTCTTGGAATGTCATGATTTCTGGATATGCTTTTCATGGTTTTAGCATTGATGCA
TTTCTGTTATTCCGTTGGATGCTCAGACAAGGTATACTCCCCGATTGCTTCACGTTTGGA
AGCATTCTCAAAGCATCTATAGGAGGTGGCAAGCGTAGTGGGCTAGCGAAAGTCAGTATG
ATACATGGATGTATCATTCGACTTGGTTATGAGTCGTACAGTATTATTAGTGGAGCATTA
GTTGATGCCTATGTAAAATGTGGAAACCTGGCCAATGCAAATTATCTATACAAGAAGTTG
CAGAACAAAGATAGGATTTCATGCACTGCGTTAATTACTGGCTATGCACGTGAAGGTAAA
AATAGCAGTGAGTACCTTGAACATTTTTGTGAATTACGTCGGATGCATAGGGAAATTGAT
AGCATTTTGTTATGCTCTATGATCAACATATGTGCCAATACAGCATCCCTGTCTTTGGGA
AGACAGCTACATGCTATTGCGATTAAATACCAGAGCACTCATGATGTGGCCATGGGTAAT
GCTTTGGTTGATATGTATGCAAAAACAGGGGAAATTGATGATGCCAACAATGTTTTTCAT
CACATGACAGAGAAAAATATAATATCATGGACGTCAATGATCTCTGCTAATGGTGCACAT
GGTCGAGGAGTTGATGCAGTTTCATGTTTTAAGAAGATGGAATGTGAAGGTTTTGAGCCA
AATGATATAACGTTCTTGTCTCTCCTGTTTGCTTGTAGTCATAACGGGTTGACTGCTGAA
GGATGGGAATGTTTCAGGAAGATGGTCAGAAAATATAAAATTATTCCAAGAGATGAGCAT
TACTCTTGCCTTGTGGACCTTTTTGCACGCAGTGGCTGTTTAAATGAATCCTACTATTTG
ATTTGCAGAATGAATATAAAGCCTAGTGCCTCTCTTTGGGGTTCAGTTCTTGGGGCATGT
AGGGTATATGGCAATATGTACCTTGGAGAGGTAGCAGCCAGGCATTTATGCAATTTTGAA
CCTATGAATGCTGTTAGCTATGTGGTTCTAGCAAGTATGTATTCTGCAGCTGGCTTATGG
GATAGTGCTCGGGATGCTCGAGATGTAGTTCAAACTAGAAGGTTAACAAAAGATCCTGGT
TACAGCCTTTTTCAATCCGATAATGATATGTTAGCACTTCCTCCTACTGGCTGA

Peptide Sequence

PEP ID

XP_016438705.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At3g20730-like isoform X2 [Nicotiana tabacum]
Sequence

MSNDMVSACNLFDKLPERNVVSWTALLSGYSQNGYSQEALDVFVAMRREGVRANQFTYGS
VLRACTSVSCLNLGKQIQGCIQKSRFLDNLCVQSALVDFHSKCGAMENAFCVFESMAERD
LVSWNVMISGYAFHGFSIDAFLLFRWMLRQGILPDCFTFGSILKASIGGGKRSGLAKVSM
IHGCIIRLGYESYSIISGALVDAYVKCGNLANANYLYKKLQNKDRISCTALITGYAREGK
NSSEYLEHFCELRRMHREIDSILLCSMINICANTASLSLGRQLHAIAIKYQSTHDVAMGN
ALVDMYAKTGEIDDANNVFHHMTEKNIISWTSMISANGAHGRGVDAVSCFKKMECEGFEP
NDITFLSLLFACSHNGLTAEGWECFRKMVRKYKIIPRDEHYSCLVDLFARSGCLNESYYL
ICRMNIKPSASLWGSVLGACRVYGNMYLGEVAARHLCNFEPMNAVSYVVLASMYSAAGLW
DSARDARDVVQTRRLTKDPGYSLFQSDNDMLALPPTG

Transcript Sequence

Gene sequence data has not been registered.